Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AP000867.4-201ENST00000641616 219 ntBASIC19■□□□□ 0.63
SPTLC1O15269 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTLC1O15269 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19■□□□□ 0.63
SPTLC1O15269 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTLC1O15269 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPTLC1O15269 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTLC1O15269 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTLC1O15269 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19■□□□□ 0.63
SPTLC1O15269 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19■□□□□ 0.63
SPTLC1O15269 KRT18P55-202ENST00000578578 1546 ntBASIC19■□□□□ 0.63
SPTLC1O15269 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SPTLC1O15269 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.99■□□□□ 0.63
SPTLC1O15269 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SPTLC1O15269 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.99■□□□□ 0.63
SPTLC1O15269 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 RBM17P3-201ENST00000417687 1192 ntBASIC18.99■□□□□ 0.63
SPTLC1O15269 AC122714.2-201ENST00000502787 707 ntBASIC18.99■□□□□ 0.63
SPTLC1O15269 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 AC148477.8-201ENST00000624298 468 ntBASIC18.99■□□□□ 0.63
SPTLC1O15269 AC012183.1-201ENST00000625197 499 ntBASIC18.99■□□□□ 0.63
SPTLC1O15269 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTLC1O15269 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTLC1O15269 SIRPAP1-201ENST00000448467 1770 ntBASIC18.98■□□□□ 0.63
SPTLC1O15269 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SPTLC1O15269 FAM197Y8-203ENST00000450145 560 ntBASIC18.98■□□□□ 0.63
SPTLC1O15269 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.98■□□□□ 0.63
SPTLC1O15269 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTLC1O15269 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTLC1O15269 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SPTLC1O15269 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SPTLC1O15269 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SPTLC1O15269 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPTLC1O15269 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTLC1O15269 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.97■□□□□ 0.63
SPTLC1O15269 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.97■□□□□ 0.63
SPTLC1O15269 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTLC1O15269 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTLC1O15269 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SPTLC1O15269 RNA5SP419-201ENST00000515908 135 ntBASIC18.97■□□□□ 0.63
SPTLC1O15269 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SPTLC1O15269 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.97■□□□□ 0.63
SPTLC1O15269 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms