Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 PCDHB19P-201ENST00000570871 2371 ntBASIC12.18□□□□□ -0.46
NDUFA1O15239 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.18□□□□□ -0.46
NDUFA1O15239 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 MFAP1P1-201ENST00000442257 1255 ntBASIC12.18□□□□□ -0.46
NDUFA1O15239 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.18□□□□□ -0.46
NDUFA1O15239 CD177P1-201ENST00000606252 935 ntBASIC12.18□□□□□ -0.46
NDUFA1O15239 AL359736.2-201ENST00000621992 437 ntBASIC12.18□□□□□ -0.46
NDUFA1O15239 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFA1O15239 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 MIR564-202ENST00000385049 94 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 AL023284.2-201ENST00000405850 579 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 CA15P1-201ENST00000481698 905 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 MIR4651-201ENST00000582622 73 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 KRT8P50-201ENST00000562022 1438 ntBASIC12.17□□□□□ -0.46
NDUFA1O15239 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFA1O15239 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFA1O15239 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NDUFA1O15239 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms