Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3D1O14617 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
AP3D1O14617 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.65■□□□□ 0.26
AP3D1O14617 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.65■□□□□ 0.26
AP3D1O14617 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 AL137013.1-201ENST00000432946 1228 ntBASIC16.65■□□□□ 0.26
AP3D1O14617 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.65■□□□□ 0.26
AP3D1O14617 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3D1O14617 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3D1O14617 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AP3D1O14617 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
AP3D1O14617 AC018695.7-201ENST00000624587 2492 ntBASIC16.64■□□□□ 0.26
AP3D1O14617 AC006116.8-202ENST00000587620 1550 ntBASIC16.64■□□□□ 0.25
AP3D1O14617 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
AP3D1O14617 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 AC005521.1-201ENST00000393351 872 ntBASIC16.64■□□□□ 0.25
AP3D1O14617 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 KRT18P57-201ENST00000443599 1254 ntBASIC16.64■□□□□ 0.25
AP3D1O14617 AL441883.1-201ENST00000566170 1045 ntBASIC16.64■□□□□ 0.25
AP3D1O14617 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.64■□□□□ 0.25
AP3D1O14617 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3D1O14617 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3D1O14617 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3D1O14617 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
AP3D1O14617 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
AP3D1O14617 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3D1O14617 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.63■□□□□ 0.25
AP3D1O14617 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.63■□□□□ 0.25
AP3D1O14617 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 COX11P1-201ENST00000489116 835 ntBASIC16.63■□□□□ 0.25
AP3D1O14617 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms