Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TVP23AA6NH52 PCDHA12-202ENST00000613593 2588 ntBASIC15.9■□□□□ 0.14
TVP23AA6NH52 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TVP23AA6NH52 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TVP23AA6NH52 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TVP23AA6NH52 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TVP23AA6NH52 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 AC087499.1-201ENST00000418141 1075 ntBASIC15.89■□□□□ 0.13
TVP23AA6NH52 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 AC009949.1-201ENST00000623048 1830 ntBASIC15.89■□□□□ 0.13
TVP23AA6NH52 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TVP23AA6NH52 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TVP23AA6NH52 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 PKD1P5-201ENST00000532415 10291 ntBASIC15.88■□□□□ 0.13
TVP23AA6NH52 SIRPAP1-201ENST00000448467 1770 ntBASIC15.88■□□□□ 0.13
TVP23AA6NH52 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AL023806.1-201ENST00000603994 1649 ntBASIC15.88■□□□□ 0.13
TVP23AA6NH52 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AL138966.2-201ENST00000621997 464 ntBASIC15.88■□□□□ 0.13
TVP23AA6NH52 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 AC133963.1-201ENST00000504166 1679 ntBASIC15.88■□□□□ 0.13
TVP23AA6NH52 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TVP23AA6NH52 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TVP23AA6NH52 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TVP23AA6NH52 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TVP23AA6NH52 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TVP23AA6NH52 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TVP23AA6NH52 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.87■□□□□ 0.13
TVP23AA6NH52 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TVP23AA6NH52 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TVP23AA6NH52 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TVP23AA6NH52 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.87■□□□□ 0.13
TVP23AA6NH52 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms