Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 AC008741.2-201ENST00000612792 3115 ntBASIC12.53□□□□□ -0.4
LINC01546A6NGU7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 LINC00554-201ENST00000564841 3011 ntBASIC12.53□□□□□ -0.4
LINC01546A6NGU7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 KSR1P1-201ENST00000446298 240 ntBASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 MTDHP1-201ENST00000605323 784 ntBASIC12.53□□□□□ -0.4
LINC01546A6NGU7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01546A6NGU7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC01546A6NGU7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC093525.9-201ENST00000624961 1746 ntBASIC12.52□□□□□ -0.41
LINC01546A6NGU7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC104390.1-201ENST00000555663 520 ntBASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC087623.3-201ENST00000607047 1098 ntBASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC083880.1-201ENST00000608266 535 ntBASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms