Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC112497.1-201ENST00000624824 639 ntBASIC15.19■□□□□ 0.02
TMEM235A6NFC5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 NUDT16P1-203ENST00000513809 620 ntBASIC15.18■□□□□ 0.02
TMEM235A6NFC5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 WWOX-216ENST00000569818 525 ntBASIC15.18■□□□□ 0.02
TMEM235A6NFC5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 MIR3180-4-201ENST00000582223 153 ntBASIC15.18■□□□□ 0.02
TMEM235A6NFC5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM235A6NFC5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 REXO1L11P-201ENST00000620964 1927 ntBASIC15.17■□□□□ 0.02
TMEM235A6NFC5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PKD1P5-201ENST00000532415 10291 ntBASIC15.17■□□□□ 0.02
TMEM235A6NFC5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PCDHB19P-201ENST00000570871 2371 ntBASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 AP003041.3-201ENST00000527151 707 ntBASIC15.17■□□□□ 0.02
TMEM235A6NFC5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms