Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 MFAP1P1-201ENST00000442257 1255 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 AC022898.2-201ENST00000616822 1312 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 AC096733.2-201ENST00000609937 1394 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 KRT8P7-201ENST00000533003 1432 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 AC132938.6-201ENST00000623828 1655 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 PCDHA14-201ENST00000506751 2298 ntBASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 MIR4674-201ENST00000582457 87 ntBASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 AF186192.3-201ENST00000583427 947 ntBASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 AL139384.1-201ENST00000612143 3047 ntBASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV18A0A075B6X5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 AC105020.1-201ENST00000435356 2205 ntBASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 AGGF1P2-201ENST00000426656 2106 ntBASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV18A0A075B6X5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms