Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 AL121761.2-201ENST00000598007 1648 ntBASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 TSPY12P-201ENST00000421279 868 ntBASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 SPDYE15P-201ENST00000424157 909 ntBASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA3Q9Y5H8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 NKILA-202ENST00000614771 2598 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 BX276092.7-203ENST00000637198 1536 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 STARP1-201ENST00000397973 869 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC005104.2-201ENST00000427818 678 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 LIN28AP1-201ENST00000429574 405 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC093827.2-201ENST00000512654 315 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC011558.1-201ENST00000623459 338 ntBASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHA3Q9Y5H8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHA3Q9Y5H8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms