Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGB4Q9UN71 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AL162727.3-201ENST00000635661 2787 ntBASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TSPY7P-201ENST00000431358 1114 ntBASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 FITM1-202ENST00000559294 800 ntBASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 AC112497.1-201ENST00000624824 639 ntBASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB4Q9UN71 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 AP000525.1-201ENST00000608286 694 ntBASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB4Q9UN71 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 AC092338.2-201ENST00000568827 1415 ntBASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB4Q9UN71 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms