Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 KRT8P47-201ENST00000604727 1398 ntBASIC16.31■□□□□ 0.2
LRFN1Q9P244 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 AL590627.1-203ENST00000421194 1026 ntBASIC16.31■□□□□ 0.2
LRFN1Q9P244 AP000347.1-202ENST00000435868 847 ntBASIC16.31■□□□□ 0.2
LRFN1Q9P244 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 AC120114.3-201ENST00000611923 658 ntBASIC16.31■□□□□ 0.2
LRFN1Q9P244 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 AC148477.8-201ENST00000624298 468 ntBASIC16.31■□□□□ 0.2
LRFN1Q9P244 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.31■□□□□ 0.2
LRFN1Q9P244 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRFN1Q9P244 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 BX640515.1-201ENST00000617215 977 ntBASIC16.3■□□□□ 0.2
LRFN1Q9P244 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 LETM1P2-201ENST00000597330 2178 ntBASIC16.3■□□□□ 0.2
LRFN1Q9P244 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 AC010460.3-201ENST00000511359 1579 ntBASIC16.3■□□□□ 0.2
LRFN1Q9P244 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN1Q9P244 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.3■□□□□ 0.2
LRFN1Q9P244 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 AC026471.1-201ENST00000564629 3026 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 AL356309.3-201ENST00000624132 1934 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 AL138781.2-201ENST00000617896 1843 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 RPS2P28-201ENST00000314255 741 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 RNA5SP419-201ENST00000515908 135 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.29■□□□□ 0.2
LRFN1Q9P244 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN1Q9P244 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms