Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 SART3-203ENST00000546611 1184 ntBASIC19.11■□□□□ 0.65
CNTN3Q9P232 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 AL773604.1-201ENST00000617417 272 ntBASIC19.11■□□□□ 0.65
CNTN3Q9P232 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 AL049757.1-201ENST00000616842 1596 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AL353593.2-201ENST00000602529 1483 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AL133373.2-201ENST00000623187 2828 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AF186996.4-201ENST00000467186 377 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC019129.2-201ENST00000609837 1235 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC073592.4-201ENST00000623827 446 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC148477.8-201ENST00000624298 468 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 SIRPAP1-201ENST00000448467 1770 ntBASIC19.1■□□□□ 0.65
CNTN3Q9P232 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTN3Q9P232 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTN3Q9P232 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 RNPS1P1-201ENST00000507437 918 ntBASIC19.09■□□□□ 0.65
CNTN3Q9P232 AC073648.2-201ENST00000510116 352 ntBASIC19.09■□□□□ 0.65
CNTN3Q9P232 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CNTN3Q9P232 AC079776.2-201ENST00000641154 1609 ntBASIC19.09■□□□□ 0.65
CNTN3Q9P232 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTN3Q9P232 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms