Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 AC073621.1-201ENST00000392730 636 ntBASIC20.04■□□□□ 0.8
COL20A1Q9P218 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 RNA5SP415-201ENST00000517246 115 ntBASIC20.04■□□□□ 0.8
COL20A1Q9P218 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 AC034105.1-201ENST00000563488 319 ntBASIC20.04■□□□□ 0.8
COL20A1Q9P218 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 AC117500.6-201ENST00000624871 588 ntBASIC20.04■□□□□ 0.8
COL20A1Q9P218 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL20A1Q9P218 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.04■□□□□ 0.8
COL20A1Q9P218 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.03■□□□□ 0.8
COL20A1Q9P218 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 AL020989.1-201ENST00000422979 469 ntBASIC20.03■□□□□ 0.8
COL20A1Q9P218 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 STK25P1-201ENST00000585406 838 ntBASIC20.03■□□□□ 0.8
COL20A1Q9P218 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL20A1Q9P218 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL20A1Q9P218 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 KLF4P1-201ENST00000412782 1185 ntBASIC20.02■□□□□ 0.8
COL20A1Q9P218 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 KRT18P58-201ENST00000527480 1120 ntBASIC20.02■□□□□ 0.8
COL20A1Q9P218 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL20A1Q9P218 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 AL354751.1-201ENST00000412768 1863 ntBASIC20.02■□□□□ 0.8
COL20A1Q9P218 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.02■□□□□ 0.8
COL20A1Q9P218 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.02■□□□□ 0.79
COL20A1Q9P218 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL20A1Q9P218 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.02■□□□□ 0.79
COL20A1Q9P218 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL20A1Q9P218 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms