Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 AC140113.3-201ENST00000605663 199 ntBASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 AL023973.1-201ENST00000624619 620 ntBASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 AC006116.8-202ENST00000587620 1550 ntBASIC17.11■□□□□ 0.33
PNPLA3Q9NST1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 AL358472.4-201ENST00000633140 710 ntBASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 AL031432.5-201ENST00000641059 760 ntBASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA3Q9NST1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AL031133.1-201ENST00000406807 723 ntBASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNPLA3Q9NST1 AC008894.3-201ENST00000624324 3103 ntBASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PNPLA3Q9NST1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.08■□□□□ 0.32
PNPLA3Q9NST1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PNPLA3Q9NST1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PNPLA3Q9NST1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PNPLA3Q9NST1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms