Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AC022145.2-201ENST00000598203 171 ntBASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 ESPNP-201ENST00000270691 2015 ntBASIC20.2■□□□□ 0.83
ZFYVE28Q9HCC9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ZFYVE28Q9HCC9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 AJ011932.1-201ENST00000621707 465 ntBASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE28Q9HCC9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 AC097637.2-201ENST00000624096 1997 ntBASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE28Q9HCC9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AC018445.3-201ENST00000624177 1945 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 PMS2P4-201ENST00000412466 1052 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 CXCL1P1-201ENST00000502804 216 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 STK19B-204ENST00000512515 211 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 DUTP2-201ENST00000519164 463 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AL353135.1-201ENST00000606729 504 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AF228730.6-201ENST00000641497 218 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AC084121.3-201ENST00000641716 218 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 AC105233.6-201ENST00000642093 218 ntBASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE28Q9HCC9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AC005034.1-201ENST00000426657 489 ntBASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AC067863.1-201ENST00000494933 530 ntBASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AC093520.2-201ENST00000561830 333 ntBASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms