Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 WWOX-216ENST00000569818 525 ntBASIC21.86■■□□□ 1.09
UPF2Q9HAU5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 AC116407.2-201ENST00000613639 860 ntBASIC21.86■■□□□ 1.09
UPF2Q9HAU5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PKD1P5-201ENST00000532415 10291 ntBASIC21.86■■□□□ 1.09
UPF2Q9HAU5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 AC008687.5-201ENST00000593746 558 ntBASIC21.85■■□□□ 1.09
UPF2Q9HAU5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF2Q9HAU5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 CR769767.2-201ENST00000622735 460 ntBASIC21.84■■□□□ 1.09
UPF2Q9HAU5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF2Q9HAU5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF2Q9HAU5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms