Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PIF1Q9H611 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PIF1Q9H611 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.02■□□□□ 0.32
PIF1Q9H611 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PIF1Q9H611 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.02■□□□□ 0.32
PIF1Q9H611 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.02■□□□□ 0.32
PIF1Q9H611 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 AC093827.2-201ENST00000512654 315 ntBASIC17.02■□□□□ 0.32
PIF1Q9H611 AP003071.4-201ENST00000562276 1284 ntBASIC17.02■□□□□ 0.32
PIF1Q9H611 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.02■□□□□ 0.32
PIF1Q9H611 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.02■□□□□ 0.32
PIF1Q9H611 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
PIF1Q9H611 REXO1L10P-201ENST00000615707 1290 ntBASIC17.02■□□□□ 0.32
PIF1Q9H611 REXO1L12P-201ENST00000622156 912 ntBASIC17.02■□□□□ 0.32
PIF1Q9H611 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.02■□□□□ 0.32
PIF1Q9H611 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.02■□□□□ 0.32
PIF1Q9H611 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PIF1Q9H611 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.02■□□□□ 0.32
PIF1Q9H611 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.02■□□□□ 0.31
PIF1Q9H611 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PIF1Q9H611 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.02■□□□□ 0.31
PIF1Q9H611 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PIF1Q9H611 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 AC132938.6-201ENST00000623828 1655 ntBASIC17.01■□□□□ 0.31
PIF1Q9H611 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PIF1Q9H611 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PIF1Q9H611 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.01■□□□□ 0.31
PIF1Q9H611 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.01■□□□□ 0.31
PIF1Q9H611 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.01■□□□□ 0.31
PIF1Q9H611 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.01■□□□□ 0.31
PIF1Q9H611 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.01■□□□□ 0.31
PIF1Q9H611 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PIF1Q9H611 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.01■□□□□ 0.31
PIF1Q9H611 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.01■□□□□ 0.31
PIF1Q9H611 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
PIF1Q9H611 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PIF1Q9H611 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17■□□□□ 0.31
PIF1Q9H611 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PIF1Q9H611 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17■□□□□ 0.31
PIF1Q9H611 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
PIF1Q9H611 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17■□□□□ 0.31
PIF1Q9H611 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17■□□□□ 0.31
PIF1Q9H611 AP005242.2-201ENST00000580065 1175 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms