Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF38Q9H0F5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF38Q9H0F5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF38Q9H0F5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF38Q9H0F5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF38Q9H0F5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 RPS2P28-201ENST00000314255 741 ntBASIC18.39■□□□□ 0.53
RNF38Q9H0F5 MIR574-201ENST00000385209 96 ntBASIC18.39■□□□□ 0.53
RNF38Q9H0F5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 OR7E14P-202ENST00000530490 1290 ntBASIC18.39■□□□□ 0.53
RNF38Q9H0F5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.39■□□□□ 0.53
RNF38Q9H0F5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF38Q9H0F5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RPL13AP23-201ENST00000480739 586 ntBASIC18.38■□□□□ 0.53
RNF38Q9H0F5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF38Q9H0F5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 AC073592.4-201ENST00000623827 446 ntBASIC18.37■□□□□ 0.53
RNF38Q9H0F5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms