Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.9■□□□□ 0.3
CNTNAP3Q9BZ76 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3Q9BZ76 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 LINC01126-201ENST00000623515 1646 ntBASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 AC092658.1-201ENST00000505836 891 ntBASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 TCF3P1-201ENST00000423021 1937 ntBASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3Q9BZ76 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC009093.7-201ENST00000623853 1223 ntBASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3Q9BZ76 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 IGLL3P-201ENST00000412472 434 ntBASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AC010336.2-201ENST00000564226 506 ntBASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AC017083.2-201ENST00000608069 979 ntBASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AL390754.1-201ENST00000619088 582 ntBASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNTNAP3Q9BZ76 AIRN-201ENST00000601203 4374 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms