Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AC006557.6-201ENST00000623071 864 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PCDHA14-201ENST00000506751 2298 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AL355312.1-201ENST00000407115 2176 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 DOC2GP-204ENST00000639052 2548 ntBASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms