Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 FAM197Y8-203ENST00000450145 560 ntBASIC17.16■□□□□ 0.34
RNF31Q96EP0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 KRT89P-201ENST00000620027 1478 ntBASIC17.16■□□□□ 0.34
RNF31Q96EP0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF31Q96EP0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF31Q96EP0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.15■□□□□ 0.34
RNF31Q96EP0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF31Q96EP0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF31Q96EP0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.14■□□□□ 0.34
RNF31Q96EP0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 TP73-AS1-210ENST00000637775 1455 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 AL590627.1-203ENST00000421194 1026 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 AC008608.2-201ENST00000606089 416 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms