Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 MIR3917-201ENST00000580971 93 ntBASIC14.06□□□□□ -0.16
NPIPB3Q92617 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.06□□□□□ -0.16
NPIPB3Q92617 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 LINC00602-201ENST00000629776 2065 ntBASIC14.06□□□□□ -0.16
NPIPB3Q92617 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB3Q92617 CYP2D8P-201ENST00000433633 1490 ntBASIC14.06□□□□□ -0.16
NPIPB3Q92617 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPB3Q92617 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 NAPSB-206ENST00000562112 1266 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AC116407.2-201ENST00000613639 860 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AP006294.2-201ENST00000641667 209 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 LINC00167-201ENST00000530583 1419 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB3Q92617 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 AP001094.4-201ENST00000579008 2176 ntBASIC14.05□□□□□ -0.16
NPIPB3Q92617 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB3Q92617 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AD000864.1-201ENST00000624076 2295 ntBASIC14.04□□□□□ -0.16
NPIPB3Q92617 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms