Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 AC079776.4-201ENST00000511039 504 ntBASIC16.82■□□□□ 0.28
TM9SF4Q92544 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 HEIH-201ENST00000623091 1652 ntBASIC16.81■□□□□ 0.28
TM9SF4Q92544 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
TM9SF4Q92544 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 KRT18P41-201ENST00000518924 1277 ntBASIC16.81■□□□□ 0.28
TM9SF4Q92544 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TM9SF4Q92544 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF4Q92544 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 KRT8P50-201ENST00000562022 1438 ntBASIC16.8■□□□□ 0.28
TM9SF4Q92544 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 AL357033.4-201ENST00000617703 1807 ntBASIC16.8■□□□□ 0.28
TM9SF4Q92544 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.8■□□□□ 0.28
TM9SF4Q92544 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 SLC25A6P4-201ENST00000586535 553 ntBASIC16.8■□□□□ 0.28
TM9SF4Q92544 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 REXO1L6P-202ENST00000619970 1078 ntBASIC16.8■□□□□ 0.28
TM9SF4Q92544 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF4Q92544 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF4Q92544 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF4Q92544 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF4Q92544 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms