Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AL138966.2-201ENST00000621997 464 ntBASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 AC034236.2-201ENST00000606662 1610 ntBASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 KRT8P50-201ENST00000562022 1438 ntBASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40AQ8WXH6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AL355312.1-201ENST00000407115 2176 ntBASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AC133963.1-201ENST00000504166 1679 ntBASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 DUX4L26-201ENST00000489078 1255 ntBASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AC141257.4-201ENST00000634557 245 ntBASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AC136944.6-201ENST00000634818 245 ntBASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40AQ8WXH6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40AQ8WXH6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms