Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC104989.1-201ENST00000519711 778 ntBASIC15.83■□□□□ 0.12
CHD6Q8TD26 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CHD6Q8TD26 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.83■□□□□ 0.12
CHD6Q8TD26 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.83■□□□□ 0.12
CHD6Q8TD26 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD6Q8TD26 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 CALR4P-201ENST00000431943 946 ntBASIC15.82■□□□□ 0.12
CHD6Q8TD26 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 FEM1AP3-201ENST00000403722 1741 ntBASIC15.82■□□□□ 0.12
CHD6Q8TD26 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 TEX21P-204ENST00000641479 1693 ntBASIC15.82■□□□□ 0.12
CHD6Q8TD26 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD6Q8TD26 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHD6Q8TD26 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 NUS1P3-201ENST00000423502 862 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 CLDN5-201ENST00000403084 2357 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 MIR1247-201ENST00000408206 136 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 HINT2P1-201ENST00000419438 481 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 AC093004.1-201ENST00000508850 424 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 GPAA1P2-201ENST00000417923 928 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 U62317.3-201ENST00000608319 855 ntBASIC15.81■□□□□ 0.12
CHD6Q8TD26 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.81■□□□□ 0.12
CHD6Q8TD26 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD6Q8TD26 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 KRT8P19-201ENST00000551916 1455 ntBASIC15.8■□□□□ 0.12
CHD6Q8TD26 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 MIR3615-201ENST00000581999 87 ntBASIC15.8■□□□□ 0.12
CHD6Q8TD26 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 AL049757.1-201ENST00000616842 1596 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms