Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 GNAS-203ENST00000306120 1878 ntBASIC18.24■□□□□ 0.51
RTL3Q8N8U3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.24■□□□□ 0.51
RTL3Q8N8U3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.23■□□□□ 0.51
RTL3Q8N8U3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 AC096582.2-201ENST00000510860 516 ntBASIC18.23■□□□□ 0.51
RTL3Q8N8U3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 AC011467.2-201ENST00000598425 242 ntBASIC18.23■□□□□ 0.51
RTL3Q8N8U3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RTL3Q8N8U3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 POM121L3P-201ENST00000419331 1163 ntBASIC18.22■□□□□ 0.51
RTL3Q8N8U3 NUS1P1-201ENST00000446295 882 ntBASIC18.22■□□□□ 0.51
RTL3Q8N8U3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTL3Q8N8U3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 FAM220CP-201ENST00000395253 831 ntBASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AC114341.1-201ENST00000618070 349 ntBASIC18.21■□□□□ 0.51
RTL3Q8N8U3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 AC067852.2-201ENST00000590513 2313 ntBASIC18.21■□□□□ 0.51
RTL3Q8N8U3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL3Q8N8U3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RTL3Q8N8U3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms