Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 AL512356.2-201ENST00000546955 174 ntBASIC14.87□□□□□ -0.03
CSMD2Q7Z408 AC116407.2-201ENST00000613639 860 ntBASIC14.87□□□□□ -0.03
CSMD2Q7Z408 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 AL805961.1-202ENST00000641562 540 ntBASIC14.86□□□□□ -0.03
CSMD2Q7Z408 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.86□□□□□ -0.03
CSMD2Q7Z408 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.86□□□□□ -0.03
CSMD2Q7Z408 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD2Q7Z408 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC023141.13-201ENST00000604991 943 ntBASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AL020989.1-201ENST00000422979 469 ntBASIC14.85□□□□□ -0.03
CSMD2Q7Z408 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD2Q7Z408 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 MYLKP1-201ENST00000509077 1580 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms