Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RGPD4Q7Z3J3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RGPD4Q7Z3J3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RGPD4Q7Z3J3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RGPD4Q7Z3J3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 FAM185BP-201ENST00000443595 716 ntBASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 AC107918.2-201ENST00000530817 355 ntBASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 GPR53P-205ENST00000457298 1084 ntBASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 SLC25A6P2-201ENST00000497974 877 ntBASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 AL132655.2-201ENST00000596276 594 ntBASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.3■■□□□ 1.16
RGPD4Q7Z3J3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 AC129492.6-201ENST00000611383 1305 ntBASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 TSSK5P-201ENST00000423978 907 ntBASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 AC097493.3-201ENST00000509725 367 ntBASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RGPD4Q7Z3J3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 LINC01006-201ENST00000333319 2292 ntBASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 AL032819.2-201ENST00000624543 2162 ntBASIC22.28■■□□□ 1.16
RGPD4Q7Z3J3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 AL645728.2-201ENST00000641974 660 ntBASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 PI4KAP1-204ENST00000612579 1703 ntBASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 AC241585.1-201ENST00000433527 519 ntBASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.27■■□□□ 1.16
RGPD4Q7Z3J3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms