Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 AL020989.1-201ENST00000422979 469 ntBASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 LINC02084-201ENST00000606069 1096 ntBASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 AC064836.3-201ENST00000607928 673 ntBASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 AC116407.2-201ENST00000613639 860 ntBASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC149Q6ZUS6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 KRT18P27-201ENST00000427733 1299 ntBASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 AP006288.1-201ENST00000446065 395 ntBASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 AL589182.2-201ENST00000619332 1049 ntBASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC149Q6ZUS6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AL353593.2-201ENST00000602529 1483 ntBASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AC108751.1-201ENST00000490852 363 ntBASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AC136632.2-201ENST00000512891 861 ntBASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms