Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 PNMT-202ENST00000394246 821 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC141Q6ZP82 SMN2-210ENST00000511812 867 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 AL590787.1-201ENST00000568856 1315 ntBASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 AP002472.1-201ENST00000577490 586 ntBASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 AC068137.2-201ENST00000605408 478 ntBASIC26.3■■□□□ 1.8
CCDC141Q6ZP82 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC141Q6ZP82 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 RPL28-205ENST00000558131 444 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC141Q6ZP82 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 SLC25A24-204ENST00000569674 2357 ntBASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 TSEN15P1-201ENST00000423257 515 ntBASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 AC092902.6-201ENST00000641783 218 ntBASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC141Q6ZP82 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 ACTG1P14-201ENST00000446382 1122 ntBASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms