Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 DUSP5P2-201ENST00000426873 1033 ntBASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 AC097658.1-201ENST00000475555 843 ntBASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 AL589743.5-201ENST00000616611 1050 ntBASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 KRT17P1-201ENST00000399211 1546 ntBASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 KRT8P20-201ENST00000423953 1409 ntBASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TMEM88Q6PEY1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 CYP21A1P-202ENST00000354927 1481 ntBASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 KRT18P68-201ENST00000392293 1000 ntBASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 AC091874.3-201ENST00000512672 1195 ntBASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 RNA5SP413-201ENST00000516373 109 ntBASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms