Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.47■■□□□ 1.03
RFX7Q2KHR2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFX7Q2KHR2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RFX7Q2KHR2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 AC012317.2-201ENST00000623305 2251 ntBASIC21.46■■□□□ 1.03
RFX7Q2KHR2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 AL590627.1-203ENST00000421194 1026 ntBASIC21.46■■□□□ 1.03
RFX7Q2KHR2 AC007967.3-201ENST00000434308 558 ntBASIC21.46■■□□□ 1.03
RFX7Q2KHR2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 AC064862.7-201ENST00000604520 867 ntBASIC21.46■■□□□ 1.03
RFX7Q2KHR2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFX7Q2KHR2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
RFX7Q2KHR2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.45■■□□□ 1.03
RFX7Q2KHR2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 LINC01451-201ENST00000623792 534 ntBASIC21.45■■□□□ 1.02
RFX7Q2KHR2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 REXO1L11P-201ENST00000620964 1927 ntBASIC21.45■■□□□ 1.02
RFX7Q2KHR2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.45■■□□□ 1.02
RFX7Q2KHR2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 AC133963.1-201ENST00000504166 1679 ntBASIC21.44■■□□□ 1.02
RFX7Q2KHR2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 AF186996.4-201ENST00000467186 377 ntBASIC21.44■■□□□ 1.02
RFX7Q2KHR2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFX7Q2KHR2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 HNRNPDP1-201ENST00000439535 754 ntBASIC21.43■■□□□ 1.02
RFX7Q2KHR2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 AC122714.2-201ENST00000502787 707 ntBASIC21.43■■□□□ 1.02
RFX7Q2KHR2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.43■■□□□ 1.02
RFX7Q2KHR2 HLA-J-201ENST00000462773 1622 ntBASIC21.43■■□□□ 1.02
RFX7Q2KHR2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
RFX7Q2KHR2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms