Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.35■□□□□ 0.37
YBX1P67809 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 AC068472.1-201ENST00000474589 881 ntBASIC17.35■□□□□ 0.37
YBX1P67809 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.35■□□□□ 0.37
YBX1P67809 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 AC069148.1-201ENST00000608741 768 ntBASIC17.35■□□□□ 0.37
YBX1P67809 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 AL592071.1-201ENST00000611956 408 ntBASIC17.35■□□□□ 0.37
YBX1P67809 AC092119.3-201ENST00000612618 583 ntBASIC17.35■□□□□ 0.37
YBX1P67809 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 AC084018.2-201ENST00000613093 2607 ntBASIC17.35■□□□□ 0.37
YBX1P67809 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
YBX1P67809 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
YBX1P67809 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.34■□□□□ 0.37
YBX1P67809 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.34■□□□□ 0.37
YBX1P67809 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.34■□□□□ 0.37
YBX1P67809 CHCHD2P8-201ENST00000429873 447 ntBASIC17.34■□□□□ 0.37
YBX1P67809 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.34■□□□□ 0.37
YBX1P67809 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.34■□□□□ 0.37
YBX1P67809 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.34■□□□□ 0.37
YBX1P67809 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.34■□□□□ 0.37
YBX1P67809 AP002414.4-201ENST00000589764 1148 ntBASIC17.34■□□□□ 0.37
YBX1P67809 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 AC008687.5-201ENST00000593746 558 ntBASIC17.34■□□□□ 0.37
YBX1P67809 IGHV3-41-201ENST00000613121 348 ntBASIC17.34■□□□□ 0.37
YBX1P67809 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
YBX1P67809 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
YBX1P67809 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
YBX1P67809 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.33■□□□□ 0.37
YBX1P67809 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
YBX1P67809 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
YBX1P67809 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
YBX1P67809 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
YBX1P67809 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
YBX1P67809 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.33■□□□□ 0.37
YBX1P67809 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
YBX1P67809 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.33■□□□□ 0.36
YBX1P67809 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.33■□□□□ 0.36
YBX1P67809 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
YBX1P67809 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
YBX1P67809 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
YBX1P67809 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
YBX1P67809 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YBX1P67809 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.33■□□□□ 0.36
YBX1P67809 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms