Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S2P56377 AC087388.1-201ENST00000571370 1112 ntBASIC17.33■□□□□ 0.36
AP1S2P56377 AL353801.3-201ENST00000609898 542 ntBASIC17.33■□□□□ 0.36
AP1S2P56377 AL592071.1-201ENST00000611956 408 ntBASIC17.33■□□□□ 0.36
AP1S2P56377 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S2P56377 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.33■□□□□ 0.36
AP1S2P56377 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S2P56377 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP1S2P56377 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP1S2P56377 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.32■□□□□ 0.36
AP1S2P56377 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP1S2P56377 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.32■□□□□ 0.36
AP1S2P56377 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.32■□□□□ 0.36
AP1S2P56377 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.32■□□□□ 0.36
AP1S2P56377 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.32■□□□□ 0.36
AP1S2P56377 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 AL121672.3-201ENST00000608644 468 ntBASIC17.32■□□□□ 0.36
AP1S2P56377 AC116407.4-201ENST00000623319 1061 ntBASIC17.32■□□□□ 0.36
AP1S2P56377 LINC00304-203ENST00000565008 1864 ntBASIC17.32■□□□□ 0.36
AP1S2P56377 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP1S2P56377 HLA-J-201ENST00000462773 1622 ntBASIC17.32■□□□□ 0.36
AP1S2P56377 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP1S2P56377 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S2P56377 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.31■□□□□ 0.36
AP1S2P56377 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AP1S2P56377 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP1S2P56377 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
AP1S2P56377 BX276092.5-203ENST00000456199 560 ntBASIC17.31■□□□□ 0.36
AP1S2P56377 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 IGHV3-41-201ENST00000613121 348 ntBASIC17.31■□□□□ 0.36
AP1S2P56377 AC124864.1-201ENST00000623408 392 ntBASIC17.31■□□□□ 0.36
AP1S2P56377 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP1S2P56377 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S2P56377 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S2P56377 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S2P56377 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
AP1S2P56377 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S2P56377 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP1S2P56377 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP1S2P56377 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S2P56377 CHCHD2P8-201ENST00000429873 447 ntBASIC17.3■□□□□ 0.36
AP1S2P56377 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.3■□□□□ 0.36
AP1S2P56377 AC246785.2-201ENST00000432512 513 ntBASIC17.3■□□□□ 0.36
AP1S2P56377 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.3■□□□□ 0.36
AP1S2P56377 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S2P56377 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP1S2P56377 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms