Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCN4P51793 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCN4P51793 AL049757.1-201ENST00000616842 1596 ntBASIC18.64■□□□□ 0.58
CLCN4P51793 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLCN4P51793 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 MCCD1P2-201ENST00000423228 335 ntBASIC18.64■□□□□ 0.57
CLCN4P51793 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN4P51793 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCN4P51793 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCN4P51793 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN4P51793 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLCN4P51793 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCN4P51793 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN4P51793 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN4P51793 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCN4P51793 AC006504.4-201ENST00000592118 1568 ntBASIC18.64■□□□□ 0.57
CLCN4P51793 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLCN4P51793 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 AC132938.5-201ENST00000624980 1813 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.63■□□□□ 0.57
CLCN4P51793 ELK2BP-201ENST00000415014 1224 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 AC211486.1-202ENST00000416371 468 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 AP006288.1-201ENST00000446065 395 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 AC211476.1-201ENST00000503899 468 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 AC148477.5-201ENST00000625164 1645 ntBASIC18.63■□□□□ 0.57
CLCN4P51793 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN4P51793 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN4P51793 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN4P51793 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN4P51793 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLCN4P51793 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLCN4P51793 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CLCN4P51793 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.62■□□□□ 0.57
CLCN4P51793 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.62■□□□□ 0.57
CLCN4P51793 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN4P51793 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.62■□□□□ 0.57
CLCN4P51793 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.62■□□□□ 0.57
CLCN4P51793 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLCN4P51793 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN4P51793 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN4P51793 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CLCN4P51793 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms