Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
USP11P51784 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 AC005104.2-201ENST00000427818 678 ntBASIC20.08■□□□□ 0.81
USP11P51784 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.08■□□□□ 0.81
USP11P51784 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.08■□□□□ 0.81
USP11P51784 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 AC111152.3-201ENST00000569699 673 ntBASIC20.08■□□□□ 0.81
USP11P51784 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP11P51784 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.08■□□□□ 0.81
USP11P51784 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.08■□□□□ 0.81
USP11P51784 IFNL4P1-201ENST00000607083 540 ntBASIC20.08■□□□□ 0.81
USP11P51784 AD001527.2-201ENST00000622994 785 ntBASIC20.08■□□□□ 0.81
USP11P51784 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.08■□□□□ 0.8
USP11P51784 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.08■□□□□ 0.8
USP11P51784 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
USP11P51784 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP11P51784 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.07■□□□□ 0.8
USP11P51784 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.07■□□□□ 0.8
USP11P51784 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 ABCD1P5-201ENST00000445663 754 ntBASIC20.07■□□□□ 0.8
USP11P51784 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 AC012317.2-201ENST00000623305 2251 ntBASIC20.07■□□□□ 0.8
USP11P51784 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 REXO1L11P-201ENST00000620964 1927 ntBASIC20.07■□□□□ 0.8
USP11P51784 AL049757.1-201ENST00000616842 1596 ntBASIC20.07■□□□□ 0.8
USP11P51784 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.07■□□□□ 0.8
USP11P51784 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
USP11P51784 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP11P51784 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
USP11P51784 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 AC018470.1-201ENST00000624790 3129 ntBASIC20.06■□□□□ 0.8
USP11P51784 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.06■□□□□ 0.8
USP11P51784 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.06■□□□□ 0.8
USP11P51784 REXO1L6P-202ENST00000619970 1078 ntBASIC20.06■□□□□ 0.8
USP11P51784 LINC01451-201ENST00000623792 534 ntBASIC20.06■□□□□ 0.8
USP11P51784 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.06■□□□□ 0.8
USP11P51784 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP11P51784 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.06■□□□□ 0.8
USP11P51784 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
USP11P51784 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
USP11P51784 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms