Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDE6CP51160 AC006116.8-202ENST00000587620 1550 ntBASIC19.24■□□□□ 0.67
PDE6CP51160 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
PDE6CP51160 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDE6CP51160 AC016734.2-201ENST00000624325 1377 ntBASIC19.24■□□□□ 0.67
PDE6CP51160 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 AP003733.1-201ENST00000491725 852 ntBASIC19.24■□□□□ 0.67
PDE6CP51160 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.24■□□□□ 0.67
PDE6CP51160 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE6CP51160 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDE6CP51160 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 CLEC4GP1-201ENST00000596555 870 ntBASIC19.24■□□□□ 0.67
PDE6CP51160 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 AC100803.2-201ENST00000562459 1963 ntBASIC19.24■□□□□ 0.67
PDE6CP51160 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE6CP51160 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PDE6CP51160 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDE6CP51160 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6CP51160 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6CP51160 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6CP51160 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.23■□□□□ 0.67
PDE6CP51160 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6CP51160 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 MIR3652-201ENST00000579335 131 ntBASIC19.23■□□□□ 0.67
PDE6CP51160 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 AC092119.3-201ENST00000612618 583 ntBASIC19.23■□□□□ 0.67
PDE6CP51160 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PDE6CP51160 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6CP51160 AL691432.3-201ENST00000621860 400 ntBASIC19.23■□□□□ 0.67
PDE6CP51160 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PDE6CP51160 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6CP51160 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE6CP51160 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDE6CP51160 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PDE6CP51160 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 AL450487.1-201ENST00000426799 995 ntBASIC19.22■□□□□ 0.67
PDE6CP51160 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE6CP51160 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PDE6CP51160 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 LINC00896-202ENST00000609602 2128 ntBASIC19.22■□□□□ 0.67
PDE6CP51160 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PDE6CP51160 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6CP51160 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms