Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.39■□□□□ 0.69
CASP4P49662 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CASP4P49662 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CASP4P49662 AP005901.3-202ENST00000581653 237 ntBASIC19.39■□□□□ 0.69
CASP4P49662 AP002414.4-201ENST00000589764 1148 ntBASIC19.39■□□□□ 0.69
CASP4P49662 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 AC093458.2-201ENST00000623150 629 ntBASIC19.39■□□□□ 0.69
CASP4P49662 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CASP4P49662 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.39■□□□□ 0.69
CASP4P49662 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CASP4P49662 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASP4P49662 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.39■□□□□ 0.69
CASP4P49662 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CASP4P49662 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.38■□□□□ 0.69
CASP4P49662 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 AC096633.1-201ENST00000422446 749 ntBASIC19.38■□□□□ 0.69
CASP4P49662 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.38■□□□□ 0.69
CASP4P49662 KRT18P1-202ENST00000452408 1331 ntBASIC19.38■□□□□ 0.69
CASP4P49662 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.38■□□□□ 0.69
CASP4P49662 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.38■□□□□ 0.69
CASP4P49662 AC133963.1-201ENST00000504166 1679 ntBASIC19.38■□□□□ 0.69
CASP4P49662 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CASP4P49662 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.38■□□□□ 0.69
CASP4P49662 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CASP4P49662 AC069148.1-201ENST00000608741 768 ntBASIC19.38■□□□□ 0.69
CASP4P49662 AC139713.2-201ENST00000641328 2723 ntBASIC19.38■□□□□ 0.69
CASP4P49662 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CASP4P49662 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP4P49662 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP4P49662 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP4P49662 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP4P49662 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
CASP4P49662 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP4P49662 TPSP2-201ENST00000561760 610 ntBASIC19.37■□□□□ 0.69
CASP4P49662 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.37■□□□□ 0.69
CASP4P49662 MIR3180-1-201ENST00000580374 94 ntBASIC19.37■□□□□ 0.69
CASP4P49662 MIR3180-3-201ENST00000584616 94 ntBASIC19.37■□□□□ 0.69
CASP4P49662 NPAP1P7-201ENST00000613027 823 ntBASIC19.37■□□□□ 0.69
CASP4P49662 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.37■□□□□ 0.69
CASP4P49662 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.37■□□□□ 0.69
CASP4P49662 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
CASP4P49662 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CASP4P49662 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP4P49662 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 AC125634.1-201ENST00000438758 1403 ntBASIC19.36■□□□□ 0.69
CASP4P49662 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.36■□□□□ 0.69
CASP4P49662 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CASP4P49662 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 UPK3BP1-201ENST00000428678 509 ntBASIC19.36■□□□□ 0.69
CASP4P49662 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.36■□□□□ 0.69
CASP4P49662 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 AC011840.4-201ENST00000578471 627 ntBASIC19.36■□□□□ 0.69
CASP4P49662 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.36■□□□□ 0.69
CASP4P49662 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms