Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-1P43699 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-1P43699 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-1P43699 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NKX2-1P43699 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NKX2-1P43699 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-1P43699 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-1P43699 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-1P43699 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NKX2-1P43699 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NKX2-1P43699 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.58□□□□□ -0.07
NKX2-1P43699 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-1P43699 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.58□□□□□ -0.07
NKX2-1P43699 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-1P43699 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
NKX2-1P43699 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
NKX2-1P43699 AC100803.2-201ENST00000562459 1963 ntBASIC14.58□□□□□ -0.07
NKX2-1P43699 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-1P43699 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
NKX2-1P43699 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-1P43699 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NKX2-1P43699 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 AC026366.1-201ENST00000488803 879 ntBASIC14.58□□□□□ -0.08
NKX2-1P43699 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-1P43699 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NKX2-1P43699 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-1P43699 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-1P43699 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-1P43699 PCDHB19P-201ENST00000570871 2371 ntBASIC14.58□□□□□ -0.08
NKX2-1P43699 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
NKX2-1P43699 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-1P43699 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 AC110285.5-201ENST00000611501 352 ntBASIC14.57□□□□□ -0.08
NKX2-1P43699 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 CR392000.1-201ENST00000624770 1228 ntBASIC14.57□□□□□ -0.08
NKX2-1P43699 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 AC022898.2-201ENST00000616822 1312 ntBASIC14.57□□□□□ -0.08
NKX2-1P43699 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NKX2-1P43699 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 AL139384.1-201ENST00000612143 3047 ntBASIC14.57□□□□□ -0.08
NKX2-1P43699 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-1P43699 HOXB1-202ENST00000577092 1414 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms