Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PRPHP41219 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
PRPHP41219 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 AC125634.1-201ENST00000438758 1403 ntBASIC20.1■□□□□ 0.81
PRPHP41219 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPHP41219 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPHP41219 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPHP41219 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PRPHP41219 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.09■□□□□ 0.81
PRPHP41219 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 MIR1224-201ENST00000408193 85 ntBASIC20.09■□□□□ 0.81
PRPHP41219 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPHP41219 AC005104.2-201ENST00000427818 678 ntBASIC20.09■□□□□ 0.81
PRPHP41219 TSSC2-201ENST00000450217 709 ntBASIC20.09■□□□□ 0.81
PRPHP41219 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.09■□□□□ 0.81
PRPHP41219 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPHP41219 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.09■□□□□ 0.81
PRPHP41219 AC011840.4-201ENST00000578471 627 ntBASIC20.09■□□□□ 0.81
PRPHP41219 AC005336.2-201ENST00000593183 939 ntBASIC20.09■□□□□ 0.81
PRPHP41219 AL138831.2-201ENST00000606564 490 ntBASIC20.09■□□□□ 0.81
PRPHP41219 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPHP41219 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPHP41219 HLA-J-201ENST00000462773 1622 ntBASIC20.09■□□□□ 0.81
PRPHP41219 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPHP41219 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.08■□□□□ 0.81
PRPHP41219 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.08■□□□□ 0.81
PRPHP41219 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.08■□□□□ 0.81
PRPHP41219 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.08■□□□□ 0.81
PRPHP41219 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPHP41219 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRPHP41219 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.08■□□□□ 0.81
PRPHP41219 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PRPHP41219 AC091076.1-201ENST00000610741 619 ntBASIC20.08■□□□□ 0.81
PRPHP41219 AL358472.4-201ENST00000633140 710 ntBASIC20.08■□□□□ 0.81
PRPHP41219 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.08■□□□□ 0.8
PRPHP41219 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.08■□□□□ 0.8
PRPHP41219 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.08■□□□□ 0.8
PRPHP41219 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PRPHP41219 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPHP41219 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.07■□□□□ 0.8
PRPHP41219 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PRPHP41219 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PRPHP41219 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRPHP41219 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.07■□□□□ 0.8
PRPHP41219 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.07■□□□□ 0.8
PRPHP41219 DRAXINP1-201ENST00000437611 948 ntBASIC20.07■□□□□ 0.8
PRPHP41219 AP002383.4-201ENST00000442518 975 ntBASIC20.07■□□□□ 0.8
PRPHP41219 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.07■□□□□ 0.8
PRPHP41219 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PRPHP41219 AC010460.3-201ENST00000511359 1579 ntBASIC20.07■□□□□ 0.8
PRPHP41219 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PRPHP41219 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PRPHP41219 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.06■□□□□ 0.8
PRPHP41219 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.06■□□□□ 0.8
PRPHP41219 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 ARMC10P1-201ENST00000313754 855 ntBASIC20.06■□□□□ 0.8
PRPHP41219 COX5BP2-201ENST00000392354 334 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms