Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.17■□□□□ 0.66
HOXA11P31270 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA11P31270 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA11P31270 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HOXA11P31270 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 AC104109.2-201ENST00000602919 1418 ntBASIC19.17■□□□□ 0.66
HOXA11P31270 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXA11P31270 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXA11P31270 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXA11P31270 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXA11P31270 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.16■□□□□ 0.66
HOXA11P31270 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXA11P31270 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HOXA11P31270 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXA11P31270 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 KRT18P58-201ENST00000527480 1120 ntBASIC19.16■□□□□ 0.66
HOXA11P31270 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HOXA11P31270 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 AC034105.1-201ENST00000563488 319 ntBASIC19.16■□□□□ 0.66
HOXA11P31270 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.16■□□□□ 0.66
HOXA11P31270 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXA11P31270 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
HOXA11P31270 AC023511.2-201ENST00000618803 211 ntBASIC19.16■□□□□ 0.66
HOXA11P31270 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HOXA11P31270 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXA11P31270 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXA11P31270 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HOXA11P31270 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HOXA11P31270 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXA11P31270 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 AC003669.1-201ENST00000334569 611 ntBASIC19.15■□□□□ 0.66
HOXA11P31270 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.15■□□□□ 0.66
HOXA11P31270 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXA11P31270 RNA5SP415-201ENST00000517246 115 ntBASIC19.15■□□□□ 0.66
HOXA11P31270 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXA11P31270 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXA11P31270 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXA11P31270 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXA11P31270 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HOXA11P31270 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.14■□□□□ 0.66
HOXA11P31270 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.66
HOXA11P31270 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HOXA11P31270 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HOXA11P31270 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 AL354751.1-201ENST00000412768 1863 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 AIRN-201ENST00000601203 4374 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXA11P31270 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.14■□□□□ 0.65
HOXA11P31270 KLF4P1-201ENST00000412782 1185 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.14■□□□□ 0.65
HOXA11P31270 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXA11P31270 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.14■□□□□ 0.65
HOXA11P31270 AL589182.2-201ENST00000619332 1049 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 AC117500.6-201ENST00000624871 588 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 AC135050.7-201ENST00000624508 2218 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 ZNF259P1-201ENST00000407656 1365 ntBASIC19.14■□□□□ 0.65
HOXA11P31270 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXA11P31270 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms