Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC103564.2-201ENST00000432853 1299 ntBASIC15.32■□□□□ 0.04
CD40P25942 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
CD40P25942 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.32■□□□□ 0.04
CD40P25942 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.32■□□□□ 0.04
CD40P25942 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 AP000867.4-201ENST00000641616 219 ntBASIC15.32■□□□□ 0.04
CD40P25942 AL356309.3-201ENST00000624132 1934 ntBASIC15.32■□□□□ 0.04
CD40P25942 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 AC100803.2-201ENST00000562459 1963 ntBASIC15.32■□□□□ 0.04
CD40P25942 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.32■□□□□ 0.04
CD40P25942 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CD40P25942 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CD40P25942 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 AP000997.3-201ENST00000623333 2250 ntBASIC15.32■□□□□ 0.04
CD40P25942 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.32■□□□□ 0.04
CD40P25942 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CD40P25942 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD40P25942 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.31■□□□□ 0.04
CD40P25942 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 AL031284.1-201ENST00000419297 478 ntBASIC15.31■□□□□ 0.04
CD40P25942 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.31■□□□□ 0.04
CD40P25942 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 AL139288.1-201ENST00000623748 933 ntBASIC15.31■□□□□ 0.04
CD40P25942 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
CD40P25942 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.31■□□□□ 0.04
CD40P25942 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD40P25942 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD40P25942 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD40P25942 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 FLJ13224-201ENST00000313737 1514 ntBASIC15.3■□□□□ 0.04
CD40P25942 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.3■□□□□ 0.04
CD40P25942 AC018712.1-201ENST00000455767 687 ntBASIC15.3■□□□□ 0.04
CD40P25942 SART3-203ENST00000546611 1184 ntBASIC15.3■□□□□ 0.04
CD40P25942 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.3■□□□□ 0.04
CD40P25942 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms