Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COL6A2P12110 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COL6A2P12110 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 AL138966.2-201ENST00000621997 464 ntBASIC17.59■□□□□ 0.41
COL6A2P12110 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL6A2P12110 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL6A2P12110 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COL6A2P12110 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
COL6A2P12110 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 AC046158.3-201ENST00000624947 2558 ntBASIC17.58■□□□□ 0.41
COL6A2P12110 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.58■□□□□ 0.41
COL6A2P12110 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL6A2P12110 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 AC016396.2-201ENST00000562575 1417 ntBASIC17.58■□□□□ 0.41
COL6A2P12110 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.58■□□□□ 0.41
COL6A2P12110 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL6A2P12110 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COL6A2P12110 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COL6A2P12110 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.4
COL6A2P12110 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COL6A2P12110 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL6A2P12110 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.58■□□□□ 0.4
COL6A2P12110 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 BX276092.7-203ENST00000637198 1536 ntBASIC17.57■□□□□ 0.4
COL6A2P12110 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 AC005104.2-201ENST00000427818 678 ntBASIC17.57■□□□□ 0.4
COL6A2P12110 RASA4DP-201ENST00000460726 1199 ntBASIC17.57■□□□□ 0.4
COL6A2P12110 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.57■□□□□ 0.4
COL6A2P12110 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 AL031432.5-201ENST00000641059 760 ntBASIC17.57■□□□□ 0.4
COL6A2P12110 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL6A2P12110 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL6A2P12110 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
COL6A2P12110 AL391807.1-203ENST00000604392 2365 ntBASIC17.57■□□□□ 0.4
COL6A2P12110 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL6A2P12110 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL6A2P12110 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms