Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.35■□□□□ 0.53
RHOP08100 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.35■□□□□ 0.53
RHOP08100 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOP08100 AC108073.2-201ENST00000464002 357 ntBASIC18.35■□□□□ 0.53
RHOP08100 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOP08100 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOP08100 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOP08100 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOP08100 MIR4751-201ENST00000578027 74 ntBASIC18.35■□□□□ 0.53
RHOP08100 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOP08100 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 WIZP1-201ENST00000531444 2299 ntBASIC18.35■□□□□ 0.53
RHOP08100 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
RHOP08100 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RHOP08100 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RHOP08100 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.34■□□□□ 0.53
RHOP08100 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 RPS15P9-201ENST00000494093 319 ntBASIC18.34■□□□□ 0.53
RHOP08100 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.34■□□□□ 0.53
RHOP08100 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.34■□□□□ 0.53
RHOP08100 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.34■□□□□ 0.53
RHOP08100 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.34■□□□□ 0.53
RHOP08100 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHOP08100 AC135776.1-201ENST00000319817 2481 ntBASIC18.33■□□□□ 0.53
RHOP08100 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RHOP08100 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.33■□□□□ 0.53
RHOP08100 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.33■□□□□ 0.53
RHOP08100 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.33■□□□□ 0.53
RHOP08100 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
RHOP08100 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RHOP08100 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.33■□□□□ 0.53
RHOP08100 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RHOP08100 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.53
RHOP08100 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RHOP08100 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.53
RHOP08100 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.33■□□□□ 0.52
RHOP08100 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.33■□□□□ 0.52
RHOP08100 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RHOP08100 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RHOP08100 MCCD1P2-201ENST00000423228 335 ntBASIC18.33■□□□□ 0.52
RHOP08100 PMS2P2-201ENST00000425039 1128 ntBASIC18.33■□□□□ 0.52
RHOP08100 VN2R19P-201ENST00000442399 1052 ntBASIC18.33■□□□□ 0.52
RHOP08100 IGHV3-65-201ENST00000523210 341 ntBASIC18.33■□□□□ 0.52
RHOP08100 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.33■□□□□ 0.52
RHOP08100 AC008667.4-201ENST00000607370 168 ntBASIC18.33■□□□□ 0.52
RHOP08100 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.33■□□□□ 0.52
RHOP08100 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
RHOP08100 AP000974.1-201ENST00000623909 2387 ntBASIC18.33■□□□□ 0.52
RHOP08100 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RHOP08100 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.33■□□□□ 0.52
RHOP08100 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RHOP08100 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 BX276092.7-203ENST00000637198 1536 ntBASIC18.33■□□□□ 0.52
RHOP08100 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RHOP08100 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RHOP08100 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RHOP08100 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RHOP08100 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms