Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CAPNS1P04632 AL023284.2-201ENST00000405850 579 ntBASIC17.71■□□□□ 0.43
CAPNS1P04632 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPNS1P04632 AF186996.4-201ENST00000467186 377 ntBASIC17.71■□□□□ 0.43
CAPNS1P04632 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPNS1P04632 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 AC139887.3-201ENST00000568585 713 ntBASIC17.71■□□□□ 0.43
CAPNS1P04632 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPNS1P04632 MIR7706-201ENST00000613747 67 ntBASIC17.71■□□□□ 0.43
CAPNS1P04632 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CAPNS1P04632 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPNS1P04632 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPNS1P04632 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPNS1P04632 AC135776.1-201ENST00000319817 2481 ntBASIC17.71■□□□□ 0.42
CAPNS1P04632 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.42
CAPNS1P04632 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
CAPNS1P04632 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 ZNF259P1-201ENST00000407656 1365 ntBASIC17.7■□□□□ 0.42
CAPNS1P04632 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPNS1P04632 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 RPSAP43-201ENST00000402237 625 ntBASIC17.7■□□□□ 0.42
CAPNS1P04632 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 AC093909.1-201ENST00000504731 1122 ntBASIC17.7■□□□□ 0.42
CAPNS1P04632 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPNS1P04632 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPNS1P04632 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPNS1P04632 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.7■□□□□ 0.42
CAPNS1P04632 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CAPNS1P04632 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPNS1P04632 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 TNRC18P3-201ENST00000441896 2691 ntBASIC17.7■□□□□ 0.42
CAPNS1P04632 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPNS1P04632 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPNS1P04632 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPNS1P04632 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CAPNS1P04632 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPNS1P04632 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 AC098831.1-202ENST00000438821 336 ntBASIC17.69■□□□□ 0.42
CAPNS1P04632 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 MIR3197-201ENST00000582241 73 ntBASIC17.69■□□□□ 0.42
CAPNS1P04632 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.69■□□□□ 0.42
CAPNS1P04632 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 AC080080.1-201ENST00000625121 2420 ntBASIC17.69■□□□□ 0.42
CAPNS1P04632 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPNS1P04632 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CAPNS1P04632 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 AC108860.2-201ENST00000562760 2183 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms