Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 AC087499.1-201ENST00000418141 1075 ntBASIC16.02■□□□□ 0.16
HLA-DPB1P04440 CCR12P-201ENST00000446203 998 ntBASIC16.02■□□□□ 0.16
HLA-DPB1P04440 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 AP003041.3-201ENST00000527151 707 ntBASIC16.02■□□□□ 0.16
HLA-DPB1P04440 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 AL023803.3-201ENST00000615559 522 ntBASIC16.02■□□□□ 0.16
HLA-DPB1P04440 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DPB1P04440 AC116562.4-202ENST00000641738 218 ntBASIC16.02■□□□□ 0.16
HLA-DPB1P04440 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 SDHAP2-201ENST00000455183 2001 ntBASIC16.02■□□□□ 0.15
HLA-DPB1P04440 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 AC009102.3-201ENST00000623118 1491 ntBASIC16.02■□□□□ 0.15
HLA-DPB1P04440 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPB1P04440 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 CROCCP2-202ENST00000412962 2773 ntBASIC16.01■□□□□ 0.15
HLA-DPB1P04440 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AL023284.2-201ENST00000405850 579 ntBASIC16.01■□□□□ 0.15
HLA-DPB1P04440 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 TSPY17P-201ENST00000450329 467 ntBASIC16.01■□□□□ 0.15
HLA-DPB1P04440 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AL353719.1-201ENST00000566847 864 ntBASIC16.01■□□□□ 0.15
HLA-DPB1P04440 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DPB1P04440 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
HLA-DPB1P04440 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HLA-DPB1P04440 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 TSPY14P-201ENST00000303979 915 ntBASIC16■□□□□ 0.15
HLA-DPB1P04440 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DPB1P04440 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16■□□□□ 0.15
HLA-DPB1P04440 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DPB1P04440 MIR149-201ENST00000384879 89 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms