Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 AP002414.3-201ENST00000589352 1468 ntBASIC19.45■□□□□ 0.7
VTNP04004 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.44■□□□□ 0.7
VTNP04004 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.44■□□□□ 0.7
VTNP04004 KRT18P58-201ENST00000527480 1120 ntBASIC19.44■□□□□ 0.7
VTNP04004 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VTNP04004 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
VTNP04004 AC132938.5-201ENST00000624980 1813 ntBASIC19.44■□□□□ 0.7
VTNP04004 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTNP04004 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 AC104109.2-201ENST00000602919 1418 ntBASIC19.43■□□□□ 0.7
VTNP04004 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 AL353593.2-201ENST00000602529 1483 ntBASIC19.43■□□□□ 0.7
VTNP04004 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.43■□□□□ 0.7
VTNP04004 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.43■□□□□ 0.7
VTNP04004 AC019129.2-201ENST00000609837 1235 ntBASIC19.43■□□□□ 0.7
VTNP04004 AC116407.2-201ENST00000613639 860 ntBASIC19.43■□□□□ 0.7
VTNP04004 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.43■□□□□ 0.7
VTNP04004 ZNF259P1-201ENST00000407656 1365 ntBASIC19.43■□□□□ 0.7
VTNP04004 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.43■□□□□ 0.7
VTNP04004 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTNP04004 SIGLEC16-201ENST00000599858 1437 ntBASIC19.42■□□□□ 0.7
VTNP04004 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.42■□□□□ 0.7
VTNP04004 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.42■□□□□ 0.7
VTNP04004 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VTNP04004 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VTNP04004 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VTNP04004 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.42■□□□□ 0.7
VTNP04004 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.42■□□□□ 0.7
VTNP04004 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.42■□□□□ 0.7
VTNP04004 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.42■□□□□ 0.7
VTNP04004 LAGE3P1-201ENST00000425356 484 ntBASIC19.42■□□□□ 0.7
VTNP04004 AC105339.3-201ENST00000560043 636 ntBASIC19.42■□□□□ 0.7
VTNP04004 AC109462.3-201ENST00000573934 613 ntBASIC19.42■□□□□ 0.7
VTNP04004 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.42■□□□□ 0.7
VTNP04004 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.42■□□□□ 0.7
VTNP04004 AC148477.5-201ENST00000625164 1645 ntBASIC19.42■□□□□ 0.7
VTNP04004 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VTNP04004 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.42■□□□□ 0.7
VTNP04004 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VTNP04004 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTNP04004 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms