Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.15■□□□□ 0.5
MT-ND3P03897 TSPY5P-201ENST00000426936 936 ntBASIC18.15■□□□□ 0.5
MT-ND3P03897 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.15■□□□□ 0.5
MT-ND3P03897 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 AC139887.4-201ENST00000607877 719 ntBASIC18.15■□□□□ 0.5
MT-ND3P03897 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
MT-ND3P03897 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
MT-ND3P03897 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.15■□□□□ 0.5
MT-ND3P03897 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
MT-ND3P03897 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.15■□□□□ 0.5
MT-ND3P03897 HOXB1-202ENST00000577092 1414 ntBASIC18.15■□□□□ 0.5
MT-ND3P03897 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MT-ND3P03897 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MT-ND3P03897 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MT-ND3P03897 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MT-ND3P03897 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND3P03897 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.14■□□□□ 0.49
MT-ND3P03897 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.14■□□□□ 0.49
MT-ND3P03897 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.14■□□□□ 0.49
MT-ND3P03897 AP000523.1-201ENST00000398242 1049 ntBASIC18.14■□□□□ 0.49
MT-ND3P03897 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.14■□□□□ 0.49
MT-ND3P03897 KRT18P23-201ENST00000435622 1283 ntBASIC18.14■□□□□ 0.49
MT-ND3P03897 YBX1P2-201ENST00000489612 999 ntBASIC18.14■□□□□ 0.49
MT-ND3P03897 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MT-ND3P03897 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.14■□□□□ 0.49
MT-ND3P03897 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND3P03897 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MT-ND3P03897 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND3P03897 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 AC084018.2-201ENST00000613093 2607 ntBASIC18.13■□□□□ 0.49
MT-ND3P03897 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 AP001094.4-201ENST00000579008 2176 ntBASIC18.13■□□□□ 0.49
MT-ND3P03897 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.13■□□□□ 0.49
MT-ND3P03897 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.13■□□□□ 0.49
MT-ND3P03897 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 MIR4674-201ENST00000582457 87 ntBASIC18.13■□□□□ 0.49
MT-ND3P03897 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 AC140113.3-201ENST00000605663 199 ntBASIC18.13■□□□□ 0.49
MT-ND3P03897 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND3P03897 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MT-ND3P03897 KRT8P7-201ENST00000533003 1432 ntBASIC18.13■□□□□ 0.49
MT-ND3P03897 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND3P03897 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms