Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 KRT17P6-201ENST00000453795 1220 ntBASIC13.76□□□□□ -0.21
TRBV12-3P01733 VENTXP7-201ENST00000475503 772 ntBASIC13.76□□□□□ -0.21
TRBV12-3P01733 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 Z69720.1-201ENST00000601483 472 ntBASIC13.76□□□□□ -0.21
TRBV12-3P01733 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV12-3P01733 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRBV12-3P01733 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 AC246785.2-201ENST00000432512 513 ntBASIC13.75□□□□□ -0.21
TRBV12-3P01733 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV12-3P01733 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 AC006116.8-202ENST00000587620 1550 ntBASIC13.75□□□□□ -0.21
TRBV12-3P01733 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
TRBV12-3P01733 NSUN5P1-202ENST00000421140 1535 ntBASIC13.74□□□□□ -0.21
TRBV12-3P01733 NSUN5P2-203ENST00000457352 1529 ntBASIC13.74□□□□□ -0.21
TRBV12-3P01733 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 AC104819.1-201ENST00000504587 486 ntBASIC13.74□□□□□ -0.21
TRBV12-3P01733 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV12-3P01733 AC010460.3-201ENST00000511359 1579 ntBASIC13.74□□□□□ -0.21
TRBV12-3P01733 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV12-3P01733 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms