Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MBD3O95983 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD3O95983 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.4■□□□□ 0.86
MBD3O95983 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD3O95983 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.39■□□□□ 0.86
MBD3O95983 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
MBD3O95983 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.39■□□□□ 0.86
MBD3O95983 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
MBD3O95983 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
MBD3O95983 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3O95983 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
MBD3O95983 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD3O95983 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD3O95983 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD3O95983 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD3O95983 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD3O95983 ESRRAP1-201ENST00000400596 1257 ntBASIC20.39■□□□□ 0.85
MBD3O95983 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD3O95983 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
MBD3O95983 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD3O95983 AC097488.1-201ENST00000507834 756 ntBASIC20.39■□□□□ 0.85
MBD3O95983 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD3O95983 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MBD3O95983 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD3O95983 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MBD3O95983 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.39■□□□□ 0.85
MBD3O95983 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
MBD3O95983 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MBD3O95983 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD3O95983 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD3O95983 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.38■□□□□ 0.85
MBD3O95983 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD3O95983 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD3O95983 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 AC010240.3-201ENST00000607688 395 ntBASIC20.38■□□□□ 0.85
MBD3O95983 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MBD3O95983 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MBD3O95983 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3O95983 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3O95983 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
MBD3O95983 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 FLJ38576-201ENST00000623820 2459 ntBASIC20.37■□□□□ 0.85
MBD3O95983 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 PCDH8P1-201ENST00000428983 2773 ntBASIC20.37■□□□□ 0.85
MBD3O95983 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms