Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CNOT4O95628 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT4O95628 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.82■□□□□ 0.12
CNOT4O95628 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT4O95628 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.82■□□□□ 0.12
CNOT4O95628 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.82■□□□□ 0.12
CNOT4O95628 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CNOT4O95628 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT4O95628 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNOT4O95628 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT4O95628 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CNOT4O95628 NSUN5P1-202ENST00000421140 1535 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CNOT4O95628 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT4O95628 KRT16P4-201ENST00000453883 522 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 MINOS1P3-201ENST00000457048 203 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 NSUN5P2-203ENST00000457352 1529 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 AC009533.2-201ENST00000543664 586 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.81■□□□□ 0.12
CNOT4O95628 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.81■□□□□ 0.12
CNOT4O95628 LINC01711-201ENST00000598340 967 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 AC097374.2-201ENST00000618617 1306 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.81■□□□□ 0.12
CNOT4O95628 AC104581.1-202ENST00000635932 2618 ntBASIC15.81■□□□□ 0.12
CNOT4O95628 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT4O95628 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT4O95628 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT4O95628 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT4O95628 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT4O95628 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT4O95628 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT4O95628 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT4O95628 TSPY19P-201ENST00000418461 509 ntBASIC15.8■□□□□ 0.12
CNOT4O95628 TSPY18P-201ENST00000441642 509 ntBASIC15.8■□□□□ 0.12
CNOT4O95628 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT4O95628 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT4O95628 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT4O95628 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT4O95628 GPALPP1-207ENST00000611650 899 ntBASIC15.8■□□□□ 0.12
CNOT4O95628 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.8■□□□□ 0.12
CNOT4O95628 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT4O95628 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT4O95628 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms